About the RDP's Pyrosequencing Pipeline
The Ribosomal Database Project's Pyrosequencing Pipeline aims to simplify the processing of large 16S rRNA sequence libraries obtained through pyrosequencing. This site processes and converts the data to formats suitable for common ecological and statistical packages such as SPADE, EstimateS, and R.
NCBI/EBI Submission Tools:
Data Processing Steps:
Formats for Common Programs:
Note: If you experience problems with the pyrosequencing pipeline, please contact us and we will help you get your sequences processed.
06/06/2013 Amplicon chimera checking with uchime
12/11/2012 RDP Hardware Upgrades
11/26/2012 Scheduled site maintenance
10/25/2012 More RDP Tools on github
10/15/2012 No result emails from pyro jobs
10/12/2012 Maintenance Complete
10/12/2012 Server Maintence