HOVER over menu item for popup description; Data Processing Steps:Formats for Common Programs:Analysis Tools:Miscellaneous Utilities:NCBI/EBI Submission Tools:RDP's mission and funding:Part of RDP's mission is to provide support to our users. Email and phone contacts are available on the contacts page. ![]() |
About the RDP PipelineRDP's Pipeline aims to simplify the processing of large rRNA sequence libraries (including single-strand and paired-end reads) obtained through high-throughput sequencing technology. This site offers tools for assembly, quality filtering, taxonomy based analysis and taxonomy independent analysis tools, and tools to convert the data to formats suitable for common ecological and statistical packages. For extremely large datasets, please use our command line tools, available through GitHub (link to https://github.com/rdpstaff). Visit our HELP page (with a topical list) or Problems with the pipeline? ANNOUNCEMENTSAnnouncements
Pyro News
01/04/2022 RDP Systems Are Running
10/04/2020 RDP Taxonomy Updated
12/12/2018 RDP and Fungene Pipelines are back online now!
12/06/2018 RDP and Fungene Pipeline problems
11/14/2018 myRDP and RDP Pipeline back to normal
06/05/2018 RDP phone system restored
06/04/2018 RDP phone system down
03/05/2018 RDP web tool problems fixed!
03/05/2018 RDP web tool problems |
Questions/comments: rdpstaff@msu.edu

